pyemma.coordinates.clustering.RegularSpaceClustering
====================================================

.. currentmodule:: pyemma.coordinates.clustering

.. autoclass:: RegularSpaceClustering

   
   .. automethod:: __init__

   
   .. rubric:: Methods

   .. autosummary::
   
      ~RegularSpaceClustering._Loggable__create_logger
      ~RegularSpaceClustering._SerializableMixIn__interpolate
      ~RegularSpaceClustering.__delattr__
      ~RegularSpaceClustering.__dir__
      ~RegularSpaceClustering.__eq__
      ~RegularSpaceClustering.__format__
      ~RegularSpaceClustering.__ge__
      ~RegularSpaceClustering.__getattribute__
      ~RegularSpaceClustering.__getstate__
      ~RegularSpaceClustering.__gt__
      ~RegularSpaceClustering.__hash__
      ~RegularSpaceClustering.__init__
      ~RegularSpaceClustering.__init_subclass__
      ~RegularSpaceClustering.__iter__
      ~RegularSpaceClustering.__le__
      ~RegularSpaceClustering.__lt__
      ~RegularSpaceClustering.__my_getstate__
      ~RegularSpaceClustering.__my_setstate__
      ~RegularSpaceClustering.__ne__
      ~RegularSpaceClustering.__new__
      ~RegularSpaceClustering.__reduce__
      ~RegularSpaceClustering.__reduce_ex__
      ~RegularSpaceClustering.__repr__
      ~RegularSpaceClustering.__setattr__
      ~RegularSpaceClustering.__setstate__
      ~RegularSpaceClustering.__sizeof__
      ~RegularSpaceClustering.__str__
      ~RegularSpaceClustering.__subclasshook__
      ~RegularSpaceClustering._check_estimated
      ~RegularSpaceClustering._chunk_finite
      ~RegularSpaceClustering._cleanup_logger
      ~RegularSpaceClustering._clear_in_memory
      ~RegularSpaceClustering._compute_default_cs
      ~RegularSpaceClustering._create_iterator
      ~RegularSpaceClustering._data_flow_chain
      ~RegularSpaceClustering._estimate
      ~RegularSpaceClustering._get_classes_to_inspect
      ~RegularSpaceClustering._get_interpolation_map
      ~RegularSpaceClustering._get_model_param_names
      ~RegularSpaceClustering._get_param_names
      ~RegularSpaceClustering._get_private_field
      ~RegularSpaceClustering._get_serialize_fields
      ~RegularSpaceClustering._get_state_of_serializeable_fields
      ~RegularSpaceClustering._get_traj_info
      ~RegularSpaceClustering._get_version
      ~RegularSpaceClustering._get_version_for_class_from_state
      ~RegularSpaceClustering._logger_is_active
      ~RegularSpaceClustering._map_to_memory
      ~RegularSpaceClustering._set_random_access_strategies
      ~RegularSpaceClustering._set_state_from_serializeable_fields_and_state
      ~RegularSpaceClustering._source_from_memory
      ~RegularSpaceClustering._transform_array
      ~RegularSpaceClustering.assign
      ~RegularSpaceClustering.describe
      ~RegularSpaceClustering.dimension
      ~RegularSpaceClustering.estimate
      ~RegularSpaceClustering.fit
      ~RegularSpaceClustering.fit_predict
      ~RegularSpaceClustering.fit_transform
      ~RegularSpaceClustering.get_model_params
      ~RegularSpaceClustering.get_output
      ~RegularSpaceClustering.get_params
      ~RegularSpaceClustering.iterator
      ~RegularSpaceClustering.load
      ~RegularSpaceClustering.n_chunks
      ~RegularSpaceClustering.n_frames_total
      ~RegularSpaceClustering.number_of_trajectories
      ~RegularSpaceClustering.output_type
      ~RegularSpaceClustering.sample_indexes_by_cluster
      ~RegularSpaceClustering.save
      ~RegularSpaceClustering.save_dtrajs
      ~RegularSpaceClustering.set_model_params
      ~RegularSpaceClustering.set_params
      ~RegularSpaceClustering.trajectory_length
      ~RegularSpaceClustering.trajectory_lengths
      ~RegularSpaceClustering.transform
      ~RegularSpaceClustering.update_model_params
      ~RegularSpaceClustering.write_to_csv
      ~RegularSpaceClustering.write_to_hdf5
   
   

   
   
   .. rubric:: Attributes

   .. autosummary::
   
      ~RegularSpaceClustering._AbstractClustering__serialize_fields
      ~RegularSpaceClustering._AbstractClustering__serialize_version
      ~RegularSpaceClustering._DataSource__serialize_fields
      ~RegularSpaceClustering._Estimator__serialize_fields
      ~RegularSpaceClustering._FALLBACK_CHUNKSIZE
      ~RegularSpaceClustering._InMemoryMixin__serialize_fields
      ~RegularSpaceClustering._InMemoryMixin__serialize_version
      ~RegularSpaceClustering._Loggable__ids
      ~RegularSpaceClustering._Loggable__refs
      ~RegularSpaceClustering._RegularSpaceClustering__serialize_version
      ~RegularSpaceClustering._SerializableMixIn__serialize_fields
      ~RegularSpaceClustering._SerializableMixIn__serialize_modifications_map
      ~RegularSpaceClustering._SerializableMixIn__serialize_version
      ~RegularSpaceClustering.__abstractmethods__
      ~RegularSpaceClustering.__dict__
      ~RegularSpaceClustering.__doc__
      ~RegularSpaceClustering.__module__
      ~RegularSpaceClustering.__weakref__
      ~RegularSpaceClustering._abc_impl
      ~RegularSpaceClustering._estimated
      ~RegularSpaceClustering._estimator_type
      ~RegularSpaceClustering._loglevel_CRITICAL
      ~RegularSpaceClustering._loglevel_DEBUG
      ~RegularSpaceClustering._loglevel_ERROR
      ~RegularSpaceClustering._loglevel_INFO
      ~RegularSpaceClustering._loglevel_WARN
      ~RegularSpaceClustering._save_data_producer
      ~RegularSpaceClustering._serialize_version
      ~RegularSpaceClustering.chunksize
      ~RegularSpaceClustering.cluster_centers_
      ~RegularSpaceClustering.clustercenters
      ~RegularSpaceClustering.data_producer
      ~RegularSpaceClustering.default_chunksize
      ~RegularSpaceClustering.dmin
      ~RegularSpaceClustering.dtrajs
      ~RegularSpaceClustering.filenames
      ~RegularSpaceClustering.in_memory
      ~RegularSpaceClustering.index_clusters
      ~RegularSpaceClustering.is_random_accessible
      ~RegularSpaceClustering.is_reader
      ~RegularSpaceClustering.logger
      ~RegularSpaceClustering.max_centers
      ~RegularSpaceClustering.model
      ~RegularSpaceClustering.n_clusters
      ~RegularSpaceClustering.n_jobs
      ~RegularSpaceClustering.name
      ~RegularSpaceClustering.ndim
      ~RegularSpaceClustering.ntraj
      ~RegularSpaceClustering.overwrite_dtrajs
      ~RegularSpaceClustering.ra_itraj_cuboid
      ~RegularSpaceClustering.ra_itraj_jagged
      ~RegularSpaceClustering.ra_itraj_linear
      ~RegularSpaceClustering.ra_linear