pyemma.coordinates.data.NumPyFileReader ======================================= .. currentmodule:: pyemma.coordinates.data .. autoclass:: NumPyFileReader .. automethod:: __init__ .. rubric:: Methods .. autosummary:: ~NumPyFileReader._Loggable__create_logger ~NumPyFileReader._SerializableMixIn__interpolate ~NumPyFileReader.__delattr__ ~NumPyFileReader.__dir__ ~NumPyFileReader.__eq__ ~NumPyFileReader.__format__ ~NumPyFileReader.__ge__ ~NumPyFileReader.__getattribute__ ~NumPyFileReader.__getstate__ ~NumPyFileReader.__gt__ ~NumPyFileReader.__hash__ ~NumPyFileReader.__init__ ~NumPyFileReader.__init_subclass__ ~NumPyFileReader.__iter__ ~NumPyFileReader.__le__ ~NumPyFileReader.__lt__ ~NumPyFileReader.__ne__ ~NumPyFileReader.__new__ ~NumPyFileReader.__reduce__ ~NumPyFileReader.__reduce_ex__ ~NumPyFileReader.__repr__ ~NumPyFileReader.__setattr__ ~NumPyFileReader.__setstate__ ~NumPyFileReader.__sizeof__ ~NumPyFileReader.__str__ ~NumPyFileReader.__subclasshook__ ~NumPyFileReader._chunk_finite ~NumPyFileReader._cleanup_logger ~NumPyFileReader._clear_in_memory ~NumPyFileReader._compute_default_cs ~NumPyFileReader._create_iterator ~NumPyFileReader._data_flow_chain ~NumPyFileReader._get_classes_to_inspect ~NumPyFileReader._get_interpolation_map ~NumPyFileReader._get_private_field ~NumPyFileReader._get_serialize_fields ~NumPyFileReader._get_state_of_serializeable_fields ~NumPyFileReader._get_traj_info ~NumPyFileReader._get_version ~NumPyFileReader._get_version_for_class_from_state ~NumPyFileReader._load_file ~NumPyFileReader._logger_is_active ~NumPyFileReader._map_to_memory ~NumPyFileReader._reshape ~NumPyFileReader._set_state_from_serializeable_fields_and_state ~NumPyFileReader._source_from_memory ~NumPyFileReader.describe ~NumPyFileReader.dimension ~NumPyFileReader.get_output ~NumPyFileReader.iterator ~NumPyFileReader.load ~NumPyFileReader.n_chunks ~NumPyFileReader.n_frames_total ~NumPyFileReader.number_of_trajectories ~NumPyFileReader.output_type ~NumPyFileReader.save ~NumPyFileReader.trajectory_length ~NumPyFileReader.trajectory_lengths ~NumPyFileReader.write_to_csv ~NumPyFileReader.write_to_hdf5 .. rubric:: Attributes .. autosummary:: ~NumPyFileReader._DataSource__serialize_fields ~NumPyFileReader._FALLBACK_CHUNKSIZE ~NumPyFileReader._InMemoryMixin__serialize_fields ~NumPyFileReader._InMemoryMixin__serialize_version ~NumPyFileReader._Loggable__ids ~NumPyFileReader._Loggable__refs ~NumPyFileReader._NumPyFileReader__serialize_version ~NumPyFileReader._SerializableMixIn__serialize_fields ~NumPyFileReader._SerializableMixIn__serialize_modifications_map ~NumPyFileReader._SerializableMixIn__serialize_version ~NumPyFileReader.__abstractmethods__ ~NumPyFileReader.__dict__ ~NumPyFileReader.__doc__ ~NumPyFileReader.__module__ ~NumPyFileReader.__weakref__ ~NumPyFileReader._abc_impl ~NumPyFileReader._loglevel_CRITICAL ~NumPyFileReader._loglevel_DEBUG ~NumPyFileReader._loglevel_ERROR ~NumPyFileReader._loglevel_INFO ~NumPyFileReader._loglevel_WARN ~NumPyFileReader._save_data_producer ~NumPyFileReader._serialize_version ~NumPyFileReader.chunksize ~NumPyFileReader.data_producer ~NumPyFileReader.default_chunksize ~NumPyFileReader.filenames ~NumPyFileReader.in_memory ~NumPyFileReader.is_random_accessible ~NumPyFileReader.is_reader ~NumPyFileReader.logger ~NumPyFileReader.name ~NumPyFileReader.ndim ~NumPyFileReader.ntraj ~NumPyFileReader.ra_itraj_cuboid ~NumPyFileReader.ra_itraj_jagged ~NumPyFileReader.ra_itraj_linear ~NumPyFileReader.ra_linear