pyemma.msm.SampledHMSM
======================

.. currentmodule:: pyemma.msm

.. autoclass:: SampledHMSM

   
   .. automethod:: __init__

   
   .. rubric:: Methods

   .. autosummary::
   
      ~SampledHMSM._SerializableMixIn__interpolate
      ~SampledHMSM.__delattr__
      ~SampledHMSM.__dir__
      ~SampledHMSM.__eq__
      ~SampledHMSM.__format__
      ~SampledHMSM.__ge__
      ~SampledHMSM.__getattribute__
      ~SampledHMSM.__getstate__
      ~SampledHMSM.__gt__
      ~SampledHMSM.__init__
      ~SampledHMSM.__init_subclass__
      ~SampledHMSM.__le__
      ~SampledHMSM.__lt__
      ~SampledHMSM.__my_getstate__
      ~SampledHMSM.__my_setstate__
      ~SampledHMSM.__ne__
      ~SampledHMSM.__new__
      ~SampledHMSM.__reduce__
      ~SampledHMSM.__reduce_ex__
      ~SampledHMSM.__repr__
      ~SampledHMSM.__setattr__
      ~SampledHMSM.__setstate__
      ~SampledHMSM.__sizeof__
      ~SampledHMSM.__str__
      ~SampledHMSM.__subclasshook__
      ~SampledHMSM._assert_in_active
      ~SampledHMSM._assert_metastable
      ~SampledHMSM._check_samples_available
      ~SampledHMSM._committor_backward
      ~SampledHMSM._committor_forward
      ~SampledHMSM._compute_eigendecomposition
      ~SampledHMSM._compute_eigenvalues
      ~SampledHMSM._ensure_eigendecomposition
      ~SampledHMSM._ensure_eigenvalues
      ~SampledHMSM._get_classes_to_inspect
      ~SampledHMSM._get_interpolation_map
      ~SampledHMSM._get_model_param_names
      ~SampledHMSM._get_private_field
      ~SampledHMSM._get_serialize_fields
      ~SampledHMSM._get_state_of_serializeable_fields
      ~SampledHMSM._get_version
      ~SampledHMSM._get_version_for_class_from_state
      ~SampledHMSM._mfpt
      ~SampledHMSM._set_state_from_serializeable_fields_and_state
      ~SampledHMSM.committor_backward
      ~SampledHMSM.committor_forward
      ~SampledHMSM.correlation
      ~SampledHMSM.eigenvalues
      ~SampledHMSM.eigenvectors_left
      ~SampledHMSM.eigenvectors_right
      ~SampledHMSM.expectation
      ~SampledHMSM.fingerprint_correlation
      ~SampledHMSM.fingerprint_relaxation
      ~SampledHMSM.get_model_params
      ~SampledHMSM.load
      ~SampledHMSM.mfpt
      ~SampledHMSM.pcca
      ~SampledHMSM.propagate
      ~SampledHMSM.relaxation
      ~SampledHMSM.sample_conf
      ~SampledHMSM.sample_f
      ~SampledHMSM.sample_mean
      ~SampledHMSM.sample_std
      ~SampledHMSM.save
      ~SampledHMSM.set_model_params
      ~SampledHMSM.simulate
      ~SampledHMSM.submodel
      ~SampledHMSM.timescales
      ~SampledHMSM.transition_matrix_obs
      ~SampledHMSM.update_model_params
   
   

   
   
   .. rubric:: Attributes

   .. autosummary::
   
      ~SampledHMSM.P
      ~SampledHMSM._HMSM__serialize_version
      ~SampledHMSM._MSM__serialize_fields
      ~SampledHMSM._MSM__serialize_version
      ~SampledHMSM._SampledHMSM__serialize_version
      ~SampledHMSM._SerializableMixIn__serialize_fields
      ~SampledHMSM._SerializableMixIn__serialize_modifications_map
      ~SampledHMSM._SerializableMixIn__serialize_version
      ~SampledHMSM.__dict__
      ~SampledHMSM.__doc__
      ~SampledHMSM.__hash__
      ~SampledHMSM.__module__
      ~SampledHMSM.__weakref__
      ~SampledHMSM._save_data_producer
      ~SampledHMSM.dt_model
      ~SampledHMSM.eigenvectors_left_obs
      ~SampledHMSM.eigenvectors_right_obs
      ~SampledHMSM.is_reversible
      ~SampledHMSM.is_sparse
      ~SampledHMSM.lifetimes
      ~SampledHMSM.metastable_assignments
      ~SampledHMSM.metastable_distributions
      ~SampledHMSM.metastable_memberships
      ~SampledHMSM.metastable_sets
      ~SampledHMSM.n_metastable
      ~SampledHMSM.neig
      ~SampledHMSM.nstates
      ~SampledHMSM.nstates_obs
      ~SampledHMSM.observation_probabilities
      ~SampledHMSM.pi
      ~SampledHMSM.reversible
      ~SampledHMSM.samples
      ~SampledHMSM.sparse
      ~SampledHMSM.stationary_distribution
      ~SampledHMSM.stationary_distribution_obs
      ~SampledHMSM.timestep_model
      ~SampledHMSM.transition_matrix