pyemma.thermo.MBAR
==================

.. currentmodule:: pyemma.thermo

.. autoclass:: MBAR

   
   .. automethod:: __init__

   
   .. rubric:: Methods

   .. autosummary::
   
      ~MBAR._Loggable__create_logger
      ~MBAR._SerializableMixIn__interpolate
      ~MBAR.__delattr__
      ~MBAR.__dir__
      ~MBAR.__eq__
      ~MBAR.__format__
      ~MBAR.__ge__
      ~MBAR.__getattribute__
      ~MBAR.__getstate__
      ~MBAR.__gt__
      ~MBAR.__init__
      ~MBAR.__init_subclass__
      ~MBAR.__le__
      ~MBAR.__lt__
      ~MBAR.__my_getstate__
      ~MBAR.__my_setstate__
      ~MBAR.__ne__
      ~MBAR.__new__
      ~MBAR.__reduce__
      ~MBAR.__reduce_ex__
      ~MBAR.__repr__
      ~MBAR.__setattr__
      ~MBAR.__setstate__
      ~MBAR.__sizeof__
      ~MBAR.__str__
      ~MBAR.__subclasshook__
      ~MBAR._check_estimated
      ~MBAR._cleanup_logger
      ~MBAR._estimate
      ~MBAR._get_classes_to_inspect
      ~MBAR._get_interpolation_map
      ~MBAR._get_model_param_names
      ~MBAR._get_param_names
      ~MBAR._get_private_field
      ~MBAR._get_serialize_fields
      ~MBAR._get_state_of_serializeable_fields
      ~MBAR._get_version
      ~MBAR._get_version_for_class_from_state
      ~MBAR._logger_is_active
      ~MBAR._set_state_from_serializeable_fields_and_state
      ~MBAR.estimate
      ~MBAR.expectation
      ~MBAR.fit
      ~MBAR.get_model_params
      ~MBAR.get_params
      ~MBAR.load
      ~MBAR.meval
      ~MBAR.pointwise_free_energies
      ~MBAR.save
      ~MBAR.set_model_params
      ~MBAR.set_params
      ~MBAR.update_model_params
   
   

   
   
   .. rubric:: Attributes

   .. autosummary::
   
      ~MBAR._Estimator__serialize_fields
      ~MBAR._Loggable__ids
      ~MBAR._Loggable__refs
      ~MBAR._MBAR__serialize_fields
      ~MBAR._MBAR__serialize_version
      ~MBAR._MultiThermModel__serialize_version
      ~MBAR._SerializableMixIn__serialize_fields
      ~MBAR._SerializableMixIn__serialize_modifications_map
      ~MBAR._SerializableMixIn__serialize_version
      ~MBAR._StationaryModel__serialize_version
      ~MBAR._SubSet__serialize_fields
      ~MBAR._SubSet__serialize_version
      ~MBAR._ThermoBase__serialize_fields
      ~MBAR._ThermoBase__serialize_version
      ~MBAR.__dict__
      ~MBAR.__doc__
      ~MBAR.__hash__
      ~MBAR.__module__
      ~MBAR.__weakref__
      ~MBAR._estimated
      ~MBAR._loglevel_CRITICAL
      ~MBAR._loglevel_DEBUG
      ~MBAR._loglevel_ERROR
      ~MBAR._loglevel_INFO
      ~MBAR._loglevel_WARN
      ~MBAR._save_data_producer
      ~MBAR.active_set
      ~MBAR.dt_traj
      ~MBAR.f
      ~MBAR.f_full_state
      ~MBAR.force_constants
      ~MBAR.free_energies
      ~MBAR.free_energies_full_state
      ~MBAR.label
      ~MBAR.logger
      ~MBAR.model
      ~MBAR.name
      ~MBAR.nstates
      ~MBAR.nstates_full
      ~MBAR.pi
      ~MBAR.pi_full_state
      ~MBAR.stationary_distribution
      ~MBAR.stationary_distribution_full_state
      ~MBAR.temperatures
      ~MBAR.umbrella_centers
      ~MBAR.unbiased_state