Plotting API¶

The plots package provides tools to plot scientific data generated by pyEMMA

plots - Plotting tools (`pyemma.plots`)¶

`plot_implied_timescales`(ITS[, ax, outfile, ...])	Generate a pretty implied timescale plot
`scatter_contour`(x, y, z[, ncontours, ...])	Shows a contour plot on scattered data (x,y,z) and the plots the positions of the points (x,y) on top.
`plot_markov_model`(P[, pos, state_sizes, ...])	Plots a network representation of a Markov model transition matrix
`plot_flux`(flux[, pos, state_sizes, ...])	Plots a network representation of the reactive flux
`NetworkPlot`(A[, pos, xpos, ypos])