data - Data and input/output utilities (pyemma.coordinates.data)¶
Order parameters¶
MDFeaturizer(topfile[, use_cache]) |
Extracts features from MD trajectories. |
CustomFeature([func]) |
A CustomFeature is the base class for user-defined features. |
Reader¶
FeatureReader(trajectories[, topologyfile, ...]) |
Reads features from MD data. |
NumPyFileReader(filenames[, chunksize, ...]) |
reads NumPy files in chunks. Supports .npy files |
PyCSVReader(filenames[, chunksize, ...]) |
Reader for tabulated ASCII data |
DataInMemory(data[, chunksize]) |
multi-dimensional data fully stored in memory. |